All functions

expNormalCountsDemo

A small normalized expected gene counts matrix for 30 patients generated to be used as a demonstration set in this package.

getGeneSignatures()

Return the selected gene list signatures

getGeneSignaturesNames()

List the names of the available signatures

plotDensityWithUpscalingSamplesBimodal()

Graph both the alternative and the signature distributions obtained for a specific signature

plotPermutationSamplesDistribution()

Graph both the alternative and the signature distributions obtained for a specific signature

runSubtypingBimodal()

Classification of heterogeneous biological samples based on gene signature lists using a mixture of two normal distributions

signaturesDemo

A short collection of published gene signatures primarily focuses on PDAC classification for patient-derived organoids (PDO). While the signatures are accurate, this list is mainly compiled for demonstration purposes.

splitTypeR-package splitTypeR

Transcriptomic classification using multimodal distributions

print(<splitTypeResults>)

Print a splitTypeResults object