consensusSeekeR: Detection of consensus peak regions inside a group of experiments using narrowPeak files

This package compares positions and ranges data from multiple experiments to extract common consensus regions. The size of the analyzed region is adjustable as well as the number of experiments in which a peak must be detected to mark a potential region as a consensus peak region.

See also

• readNarrowPeakFile for extracting regions and peaks from a narrowPeak file.

• findConsensusPeakRegions for extracting regions sharing the same features in more than one experiment.

Author

Astrid Deschênes, Fabien Claude Lamaze, Pascal Belleau and Arnaud Droit

Maintainer: Astrid Deschênes <adeschen@hotmail.com>